WormBase Tree Display for Variation: WBVar00147563
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WBVar00147563 | Name | Public_name | WBVar00147563 | ||
---|---|---|---|---|---|
Other_name | haw813 | ||||
haw112686 | |||||
cewivar00160882 | |||||
Y65B4BR.2f.1:c.569-186T>A | |||||
Y65B4BR.2e.1:c.527-186T>A | |||||
Y65B4BR.2d.1:c.569-186T>A | |||||
Y65B4BR.2c.1:c.440-186T>A | |||||
Y65B4BR.2b.1:c.398-186T>A | |||||
Y65B4BR.2a.1:c.527-186T>A | |||||
HGVSg | CHROMOSOME_I:g.560516T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y65B4BR | |
Flanking_sequences | ttgaatttctcgccaaagttttttc | caaaaaatttgaatttcctgtcaaa | |||
Mapping_target | Y65B4BR | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01285661 | |||
WBVar00532551 | |||||
Status | Live | ||||
Affects | Gene | WBGene00002393 | |||
Transcript | Y65B4BR.2e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y65B4BR.2e.1:c.527-186T>A | ||||
Intron_number | 5/6 | ||||
Y65B4BR.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y65B4BR.2a.1:c.527-186T>A | ||||
Intron_number | 5/7 | ||||
Y65B4BR.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y65B4BR.2c.1:c.440-186T>A | ||||
Intron_number | 2/4 | ||||
Y65B4BR.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y65B4BR.2b.1:c.398-186T>A | ||||
Intron_number | 3/4 | ||||
Y65B4BR.2f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y65B4BR.2f.1:c.569-186T>A | ||||
Intron_number | 4/5 | ||||
Y65B4BR.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y65B4BR.2d.1:c.569-186T>A | ||||
Intron_number | 4/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw813 | ||||
Method | WGS_Hawaiian_Waterston |