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WormBase Tree Display for Variation: WBVar00147780

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Name Class

WBVar00147780NamePublic_nameWBVar00147780
Other_namehaw1030
haw112867
cewivar00161104
Y18H1A.3e.1:c.3768+307G>A
Y18H1A.3b.1:c.1677+307G>A
Y18H1A.3d.1:c.2751+307G>A
Y18H1A.3c.1:c.2094+307G>A
Y18H1A.3a.1:c.3414+307G>A
HGVSgCHROMOSOME_I:g.701449C>T
Sequence_detailsSMapS_parentSequenceY18H1A
Flanking_sequencesttttactttttaaaaatatttttttaaattctggcagttttaaaataata
Mapping_targetY18H1A
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01289573
WBVar00532732
StatusLive
AffectsGeneWBGene00021209
TranscriptY18H1A.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY18H1A.3c.1:c.2094+307G>A
Intron_number4/4
Y18H1A.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY18H1A.3a.1:c.3414+307G>A
Intron_number11/12
Y18H1A.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY18H1A.3d.1:c.2751+307G>A
Intron_number6/6
Y18H1A.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY18H1A.3e.1:c.3768+307G>A
Intron_number11/11
Y18H1A.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY18H1A.3b.1:c.1677+307G>A
Intron_number2/2
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw1030
MethodWGS_Hawaiian_Waterston