WormBase Tree Display for Variation: WBVar00147780
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WBVar00147780 | Name | Public_name | WBVar00147780 | ||
---|---|---|---|---|---|
Other_name | haw1030 | ||||
haw112867 | |||||
cewivar00161104 | |||||
Y18H1A.3e.1:c.3768+307G>A | |||||
Y18H1A.3b.1:c.1677+307G>A | |||||
Y18H1A.3d.1:c.2751+307G>A | |||||
Y18H1A.3c.1:c.2094+307G>A | |||||
Y18H1A.3a.1:c.3414+307G>A | |||||
HGVSg | CHROMOSOME_I:g.701449C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y18H1A | |
Flanking_sequences | ttttactttttaaaaatattttttt | aaattctggcagttttaaaataata | |||
Mapping_target | Y18H1A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01289573 | |||
WBVar00532732 | |||||
Status | Live | ||||
Affects | Gene | WBGene00021209 | |||
Transcript | Y18H1A.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y18H1A.3c.1:c.2094+307G>A | ||||
Intron_number | 4/4 | ||||
Y18H1A.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y18H1A.3a.1:c.3414+307G>A | ||||
Intron_number | 11/12 | ||||
Y18H1A.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y18H1A.3d.1:c.2751+307G>A | ||||
Intron_number | 6/6 | ||||
Y18H1A.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y18H1A.3e.1:c.3768+307G>A | ||||
Intron_number | 11/11 | ||||
Y18H1A.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y18H1A.3b.1:c.1677+307G>A | ||||
Intron_number | 2/2 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw1030 | ||||
Method | WGS_Hawaiian_Waterston |