WormBase Tree Display for Variation: WBVar00147965
expand all nodes | collapse all nodes | view schema
WBVar00147965 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00147965 | |||
Other_name | haw1215 | ||||
cewivar00161278 | |||||
Y95B8A.12e.1:c.1510+154A>G | |||||
Y95B8A.12c.1:c.1552+154A>G | |||||
Y95B8A.12f.1:c.1528+154A>G | |||||
Y95B8A.12d.1:c.1534+154A>G | |||||
Y95B8A.12b.1:c.1507+154A>G | |||||
Y95B8A.12a.1:c.1531+154A>G | |||||
HGVSg | CHROMOSOME_I:g.913848T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y95B8A | |
Flanking_sequences | ggatagttttttttaatataagaaa | gatgatgaactatatatactactat | |||
Mapping_target | Y95B8A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01293317 | |||
Status | Live | ||||
Affects | Gene | WBGene00022391 | |||
Transcript | Y95B8A.12f.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y95B8A.12f.1:c.1528+154A>G | ||||
Intron_number | 9/11 | ||||
Y95B8A.12d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y95B8A.12d.1:c.1534+154A>G | ||||
Intron_number | 9/10 | ||||
Y95B8A.12a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y95B8A.12a.1:c.1531+154A>G | ||||
Intron_number | 10/12 | ||||
Y95B8A.12e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y95B8A.12e.1:c.1510+154A>G | ||||
Intron_number | 9/11 | ||||
Y95B8A.12c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y95B8A.12c.1:c.1552+154A>G | ||||
Intron_number | 10/12 | ||||
Y95B8A.12b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y95B8A.12b.1:c.1507+154A>G | ||||
Intron_number | 9/11 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw1215 | ||||
Method | WGS_Hawaiian_Waterston |