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WormBase Tree Display for Variation: WBVar00148315

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Name Class

WBVar00148315NamePublic_nameWBVar00148315
Other_namehaw1565
haw113330
cewivar00161512
Y48G8AL.10b.1:c.1981-42T>G
Y48G8AL.10c.1:c.1945-42T>G
Y48G8AL.10a.1:c.3070-42T>G
Y48G8AL.10d.1:c.1045-42T>G
HGVSgCHROMOSOME_I:g.1140310A>C
Sequence_detailsSMapS_parentSequenceY48G8AL
Flanking_sequencestcatatctactagaatcgaattatttgggaacccaaaattccgagaaatg
Mapping_targetY48G8AL
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01299306
WBVar00533195
StatusLive
AffectsGeneWBGene00021689
TranscriptY48G8AL.10d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.10d.1:c.1045-42T>G
Intron_number5/7
Y48G8AL.10a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.10a.1:c.3070-42T>G
Intron_number11/14
Y48G8AL.10c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.10c.1:c.1945-42T>G
Intron_number6/8
Y48G8AL.10b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.10b.1:c.1981-42T>G
Intron_number7/9
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw1565
MethodWGS_Hawaiian_Waterston