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WormBase Tree Display for Variation: WBVar00148523

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Name Class

WBVar00148523NamePublic_nameWBVar00148523
Other_namehaw1773
cewivar00119575
Y48G8AL.1d.1:c.190-78T>G
Y48G8AL.1a.1:c.1735-78T>G
Y48G8AL.1c.1:c.607-78T>G
Y48G8AL.1a.2:c.1735-78T>G
Y48G8AL.1b.1:c.742-78T>G
HGVSgCHROMOSOME_I:g.1239361T>G
Sequence_detailsSMapS_parentSequenceY48G8AL
Flanking_sequencesaaaaaaaaacaattctgaaactttgtttttttccggtttttaacgttttg
Mapping_targetY48G8AL
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021685
TranscriptY48G8AL.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1b.1:c.742-78T>G
Intron_number5/12
Y48G8AL.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1c.1:c.607-78T>G
Intron_number4/11
Y48G8AL.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1a.2:c.1735-78T>G
Intron_number11/19
Y48G8AL.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1a.1:c.1735-78T>G
Intron_number11/19
Y48G8AL.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1d.1:c.190-78T>G
Intron_number2/9
Remark[20081124 db] this Variation was previously named hw1773
MethodWGS_Hawaiian_Waterston