WormBase Tree Display for Variation: WBVar00148523
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WBVar00148523 | Name | Public_name | WBVar00148523 | ||
---|---|---|---|---|---|
Other_name | haw1773 | ||||
cewivar00119575 | |||||
Y48G8AL.1d.1:c.190-78T>G | |||||
Y48G8AL.1a.1:c.1735-78T>G | |||||
Y48G8AL.1c.1:c.607-78T>G | |||||
Y48G8AL.1a.2:c.1735-78T>G | |||||
Y48G8AL.1b.1:c.742-78T>G | |||||
HGVSg | CHROMOSOME_I:g.1239361T>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y48G8AL | |
Flanking_sequences | aaaaaaaaacaattctgaaactttg | tttttttccggtttttaacgttttg | |||
Mapping_target | Y48G8AL | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021685 | |||
Transcript | Y48G8AL.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1b.1:c.742-78T>G | ||||
Intron_number | 5/12 | ||||
Y48G8AL.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1c.1:c.607-78T>G | ||||
Intron_number | 4/11 | ||||
Y48G8AL.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1a.2:c.1735-78T>G | ||||
Intron_number | 11/19 | ||||
Y48G8AL.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1a.1:c.1735-78T>G | ||||
Intron_number | 11/19 | ||||
Y48G8AL.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1d.1:c.190-78T>G | ||||
Intron_number | 2/9 | ||||
Remark | [20081124 db] this Variation was previously named hw1773 | ||||
Method | WGS_Hawaiian_Waterston |