WormBase Tree Display for Variation: WBVar00149160
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| WBVar00149160 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00149160 | |||
| Other_name | haw2410 | ||||
| cewivar00161952 | |||||
| Y73E7A.9c.1:c.285+1079G>C | |||||
| Y73E7A.9b.1:c.438+1079G>C | |||||
| Y73E7A.9a.1:c.1062+1079G>C | |||||
| HGVSg | CHROMOSOME_I:g.1614974G>C | ||||
| Sequence_details | SMap | S_parent | Sequence | Y73E7A | |
| Flanking_sequences | attcgaattgatttttttccaaaaa | gcttgaattgtggaagtatcgaaaa | |||
| Mapping_target | Y73E7A | ||||
| Type_of_mutation | Substitution | G | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01418089 | |||
| WBVar01312995 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00044440 | |||
| Transcript | Y73E7A.9a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y73E7A.9a.1:c.1062+1079G>C | ||||
| Intron_number | 5/8 | ||||
| Y73E7A.9c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y73E7A.9c.1:c.285+1079G>C | ||||
| Intron_number | 1/3 | ||||
| Y73E7A.9b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y73E7A.9b.1:c.438+1079G>C | ||||
| Intron_number | 2/4 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw2410 | ||||
| Method | WGS_Hawaiian_Waterston |
