WormBase Tree Display for Variation: WBVar00149258
expand all nodes | collapse all nodes | view schema
WBVar00149258 | Name | Public_name | WBVar00149258 | ||
---|---|---|---|---|---|
Other_name | haw2508 | ||||
haw113987 | |||||
cewivar00162029 | |||||
Y71G12B.18b.1:c.241-166G>A | |||||
Y71G12B.18a.1:c.400-166G>A | |||||
HGVSg | CHROMOSOME_I:g.1654587G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y71G12B | |
Flanking_sequences | acagtaccccgcaacaaatttccac | catcaagatttatggaagacaattt | |||
Mapping_target | Y71G12B | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00533852 | |||
WBVar01314439 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022156 | |||
Transcript | Y71G12B.18a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.18a.1:c.400-166G>A | ||||
Intron_number | 4/6 | ||||
Y71G12B.18b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.18b.1:c.241-166G>A | ||||
Intron_number | 2/3 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw2508 | ||||
Method | WGS_Hawaiian_Waterston |