Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00149679

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00149679EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00149679
Other_namehaw2929
cewivar00070129
Y71G12A.2c.1:c.-576-4C>T
Y71G12A.2c.3:c.-576-4C>T
Y71G12A.2c.2:c.-576-4C>T
Y71G12A.2b.1:c.1924-4C>T
HGVSgCHROMOSOME_I:g.1908195C>T
Sequence_detailsSMapS_parentSequenceY71G12A
Flanking_sequencesaaaatatttaattttaaaaaaatttcagaaaaaagagaatatttgccgtc
Mapping_targetY71G12A
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (37)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01418916
WBVar01321339
StatusLive
AffectsGeneWBGene00022138
TranscriptY71G12A.2c.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY71G12A.2c.1:c.-576-4C>T
Intron_number7/14
Y71G12A.2b.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY71G12A.2b.1:c.1924-4C>T
Intron_number9/15
Y71G12A.2c.2VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY71G12A.2c.2:c.-576-4C>T
Intron_number4/11
Y71G12A.2c.3VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY71G12A.2c.3:c.-576-4C>T
Intron_number2/9
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw2929
MethodWGS_Hawaiian_Waterston