WormBase Tree Display for Variation: WBVar00149690
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WBVar00149690 | Name | Public_name | WBVar00149690 | ||
---|---|---|---|---|---|
Other_name | haw2940 | ||||
haw114311 | |||||
cewivar00162345 | |||||
Y71G12A.2c.3:c.-269-131G>A | |||||
Y71G12A.2c.1:c.-269-131G>A | |||||
Y71G12A.2b.1:c.2231-131G>A | |||||
Y71G12A.2c.2:c.-269-131G>A | |||||
HGVSg | CHROMOSOME_I:g.1910084G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y71G12A | |
Flanking_sequences | attttgaaaaaaaaattatgtaaac | tttttgaaaatctgaaaatttagcc | |||
Mapping_target | Y71G12A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00534176 | |||
WBVar01321450 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022138 | |||
Transcript | Y71G12A.2c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12A.2c.1:c.-269-131G>A | ||||
Intron_number | 8/14 | ||||
Y71G12A.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12A.2b.1:c.2231-131G>A | ||||
Intron_number | 10/15 | ||||
Y71G12A.2c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12A.2c.2:c.-269-131G>A | ||||
Intron_number | 5/11 | ||||
Y71G12A.2c.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12A.2c.3:c.-269-131G>A | ||||
Intron_number | 3/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw2940 | ||||
Method | WGS_Hawaiian_Waterston |