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WormBase Tree Display for Variation: WBVar00149746

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Name Class

WBVar00149746EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00149746
Other_namehaw2996
haw114346
cewivar00070282
Y51F10.4a.1:c.1651+560A>C
Y51F10.4d.1:c.346+560A>C
Y51F10.4c.1:c.1021+560A>C
Y51F10.4e.1:c.100+560A>C
Y51F10.4b.1:c.1132+560A>C
HGVSgCHROMOSOME_I:g.1944157A>C
Sequence_detailsSMapS_parentSequenceY51F10
Flanking_sequencesattttccaaataaagtaaaattaaaatttttttgaaacaagttttaaaaa
Mapping_targetY51F10
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (16)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00534211
StatusLive
AffectsGeneWBGene00021765
TranscriptY51F10.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY51F10.4e.1:c.100+560A>C
Intron_number1/1
Y51F10.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY51F10.4c.1:c.1021+560A>C
Intron_number3/3
Y51F10.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY51F10.4b.1:c.1132+560A>C
Intron_number5/6
Y51F10.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY51F10.4d.1:c.346+560A>C
Intron_number2/2
Y51F10.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY51F10.4a.1:c.1651+560A>C
Intron_number6/7
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw2996
MethodWGS_Hawaiian_Waterston