WormBase Tree Display for Variation: WBVar00149746
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WBVar00149746 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00149746 | |||
Other_name | haw2996 | ||||
haw114346 | |||||
cewivar00070282 | |||||
Y51F10.4a.1:c.1651+560A>C | |||||
Y51F10.4d.1:c.346+560A>C | |||||
Y51F10.4c.1:c.1021+560A>C | |||||
Y51F10.4e.1:c.100+560A>C | |||||
Y51F10.4b.1:c.1132+560A>C | |||||
HGVSg | CHROMOSOME_I:g.1944157A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y51F10 | |
Flanking_sequences | attttccaaataaagtaaaattaaa | atttttttgaaacaagttttaaaaa | |||
Mapping_target | Y51F10 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (16) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00534211 | |||
Status | Live | ||||
Affects | Gene | WBGene00021765 | |||
Transcript | Y51F10.4e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y51F10.4e.1:c.100+560A>C | ||||
Intron_number | 1/1 | ||||
Y51F10.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y51F10.4c.1:c.1021+560A>C | ||||
Intron_number | 3/3 | ||||
Y51F10.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y51F10.4b.1:c.1132+560A>C | ||||
Intron_number | 5/6 | ||||
Y51F10.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y51F10.4d.1:c.346+560A>C | ||||
Intron_number | 2/2 | ||||
Y51F10.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y51F10.4a.1:c.1651+560A>C | ||||
Intron_number | 6/7 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw2996 | ||||
Method | WGS_Hawaiian_Waterston |