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WormBase Tree Display for Variation: WBVar00150017

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Name Class

WBVar00150017NamePublic_nameWBVar00150017
Other_namehaw3267
haw114543
cewivar00134318
Y37E3.17a.1:c.185-1407T>A
Y37E3.17c.1:c.185-1407T>A
Y37E3.17d.1:c.185-472T>A
Y37E3.17b.1:c.185-472T>A
HGVSgCHROMOSOME_I:g.2133380T>A
Sequence_detailsSMapS_parentSequenceY37E3
Flanking_sequencescaaacatctatcaaaaacatccatctggaggcaatgaacttatccgtctt
Mapping_targetY37E3
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (22)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01327772
WBVar01278783
WBVar01419106
WBVar00534408
StatusLive
AffectsGeneWBGene00021355
TranscriptY37E3.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY37E3.17b.1:c.185-472T>A
Intron_number1/11
Y37E3.17d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY37E3.17d.1:c.185-472T>A
Intron_number1/10
Y37E3.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY37E3.17a.1:c.185-1407T>A
Intron_number1/10
Y37E3.17c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY37E3.17c.1:c.185-1407T>A
Intron_number2/11
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw3267
MethodWGS_Hawaiian_Waterston