WormBase Tree Display for Variation: WBVar00150017
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WBVar00150017 | Name | Public_name | WBVar00150017 | ||
---|---|---|---|---|---|
Other_name | haw3267 | ||||
haw114543 | |||||
cewivar00134318 | |||||
Y37E3.17a.1:c.185-1407T>A | |||||
Y37E3.17c.1:c.185-1407T>A | |||||
Y37E3.17d.1:c.185-472T>A | |||||
Y37E3.17b.1:c.185-472T>A | |||||
HGVSg | CHROMOSOME_I:g.2133380T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y37E3 | |
Flanking_sequences | caaacatctatcaaaaacatccatc | tggaggcaatgaacttatccgtctt | |||
Mapping_target | Y37E3 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (22) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01327772 | |||
WBVar01278783 | |||||
WBVar01419106 | |||||
WBVar00534408 | |||||
Status | Live | ||||
Affects | Gene | WBGene00021355 | |||
Transcript | Y37E3.17b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y37E3.17b.1:c.185-472T>A | ||||
Intron_number | 1/11 | ||||
Y37E3.17d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37E3.17d.1:c.185-472T>A | ||||
Intron_number | 1/10 | ||||
Y37E3.17a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37E3.17a.1:c.185-1407T>A | ||||
Intron_number | 1/10 | ||||
Y37E3.17c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37E3.17c.1:c.185-1407T>A | ||||
Intron_number | 2/11 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw3267 | ||||
Method | WGS_Hawaiian_Waterston |