WormBase Tree Display for Variation: WBVar00150124
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| WBVar00150124 | Name | Public_name | WBVar00150124 | ||
|---|---|---|---|---|---|
| Other_name (12) | |||||
| HGVSg | CHROMOSOME_I:g.2176258G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | W03F11 | |
| Flanking_sequences | tatcgtgacacacaattgaccatac | gttgtacatatacatatgtttgtgt | |||
| Mapping_target | W03F11 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01329161 | |||
| WBVar00534477 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021009 | |||
| Transcript | W03F11.6o.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03F11.6o.1:c.795+1274G>T | ||||
| Intron_number | 6/17 | ||||
| W03F11.6i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03F11.6i.1:c.261+1274G>T | ||||
| Intron_number | 3/13 | ||||
| W03F11.6f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03F11.6f.1:c.1281+1274G>T | ||||
| Intron_number | 10/21 | ||||
| W03F11.6j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03F11.6j.1:c.261+1274G>T | ||||
| Intron_number | 3/13 | ||||
| W03F11.6c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03F11.6c.1:c.1281+1274G>T | ||||
| Intron_number | 10/21 | ||||
| W03F11.6a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03F11.6a.1:c.1275+1274G>T | ||||
| Intron_number | 10/21 | ||||
| W03F11.6h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03F11.6h.1:c.447+1274G>T | ||||
| Intron_number | 4/14 | ||||
| W03F11.6g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03F11.6g.1:c.447+1274G>T | ||||
| Intron_number | 4/14 | ||||
| W03F11.6d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03F11.6d.1:c.1275+1274G>T | ||||
| Intron_number | 10/21 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw3374 | ||||
| Method | WGS_Hawaiian_Waterston |
