WormBase Tree Display for Variation: WBVar00150418
expand all nodes | collapse all nodes | view schema
WBVar00150418 | Name | Public_name | WBVar00150418 | ||
---|---|---|---|---|---|
Other_name | haw3668 | ||||
Y39G10AR.18a.1:c.2440+251T>A | |||||
Y39G10AR.18b.2:c.1360+251T>A | |||||
Y39G10AR.18b.1:c.1360+251T>A | |||||
Y39G10AR.18c.1:c.691+251T>A | |||||
HGVSg | CHROMOSOME_I:g.2387906A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y39G10AR | |
Flanking_sequences | tttttttactggaaaaaaactaaaa | tttgtcaattttcgaaaaatcagaa | |||
Mapping_target | Y39G10AR | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00021474 | |||
Transcript | Y39G10AR.18a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y39G10AR.18a.1:c.2440+251T>A | ||||
Intron_number | 14/16 | ||||
Y39G10AR.18b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39G10AR.18b.2:c.1360+251T>A | ||||
Intron_number | 6/7 | ||||
Y39G10AR.18b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39G10AR.18b.1:c.1360+251T>A | ||||
Intron_number | 6/8 | ||||
Y39G10AR.18c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39G10AR.18c.1:c.691+251T>A | ||||
Intron_number | 2/2 | ||||
Remark | [20081124 db] this Variation was previously named hw3668 | ||||
Method | WGS_Hawaiian_Waterston |