WormBase Tree Display for Variation: WBVar00150951
expand all nodes | collapse all nodes | view schema
WBVar00150951 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00150951 | |||
Other_name | haw4201 | ||||
cewivar00163366 | |||||
F32B5.7b.1:c.400-471A>T | |||||
F32B5.7a.2:c.616-471A>T | |||||
F32B5.7a.1:c.616-471A>T | |||||
HGVSg | CHROMOSOME_I:g.2678526T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F32B5 | |
Flanking_sequences | tgagtttggggtataattttttttt | aaagtttttcgcaaagaccttgctt | |||
Mapping_target | F32B5 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
WBStrain00005835 | From_analysis | WGS_Andersen | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | |||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01430734 | |||
Status | Live | ||||
Affects | Gene | WBGene00017980 | |||
Transcript | F32B5.7a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F32B5.7a.1:c.616-471A>T | ||||
Intron_number | 6/12 | ||||
F32B5.7a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F32B5.7a.2:c.616-471A>T | ||||
Intron_number | 6/13 | ||||
F32B5.7b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F32B5.7b.1:c.400-471A>T | ||||
Intron_number | 4/9 | ||||
Reference | WBPaper00040707 | ||||
Remark | [20081124 db] this Variation was previously named hw4201 | ||||
Method | WGS_Hawaiian_Waterston |