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WormBase Tree Display for Variation: WBVar00151015

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Name Class

WBVar00151015NamePublic_nameWBVar00151015
Other_namehaw4265
haw115318
cewivar00163424
Y71F9B.5a.1:c.1552-343A>T
Y71F9B.5c.1:c.1348-343A>T
Y71F9B.5a.2:c.1552-343A>T
Y71F9B.5b.1:c.1556-343A>T
HGVSgCHROMOSOME_I:g.2716887A>T
Sequence_detailsSMapS_parentSequenceY71F9B
Flanking_sequencesaaaaaagaaaattttaaattgagaattccttttaaaaaagcttttctttt
Mapping_targetY71F9B
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00535183
WBVar01340638
StatusLive
AffectsGeneWBGene00003006
TranscriptY71F9B.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.5c.1:c.1348-343A>T
Intron_number6/6
Y71F9B.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.5a.1:c.1552-343A>T
Intron_number9/10
Y71F9B.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.5b.1:c.1556-343A>T
Intron_number9/10
Y71F9B.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.5a.2:c.1552-343A>T
Intron_number10/11
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw4265
MethodWGS_Hawaiian_Waterston