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WormBase Tree Display for Variation: WBVar00151090

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Name Class

WBVar00151090EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00151090
Other_namehaw4340
cewivar00163470
Y71F9B.10g.1:c.1624+165A>T
Y71F9B.10e.1:c.676+165A>T
Y71F9B.10b.1:c.1624+165A>T
Y71F9B.10a.1:c.1624+165A>T
Y71F9B.10c.1:c.1624+165A>T
Y71F9B.10d.1:c.676+165A>T
HGVSgCHROMOSOME_I:g.2768483T>A
Sequence_detailsSMapS_parentSequenceY71F9B
Flanking_sequencesaaaaaaaaaccgattttttggattttcagaataaaaaacgatttttttgt
Mapping_targetY71F9B
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01340763
StatusLive
AffectsGeneWBGene00004946
TranscriptY71F9B.10g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.10g.1:c.1624+165A>T
Intron_number9/16
Y71F9B.10d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.10d.1:c.676+165A>T
Intron_number3/8
Y71F9B.10c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.10c.1:c.1624+165A>T
Intron_number9/15
Y71F9B.10e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.10e.1:c.676+165A>T
Intron_number3/8
Y71F9B.10b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.10b.1:c.1624+165A>T
Intron_number9/16
Y71F9B.10a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71F9B.10a.1:c.1624+165A>T
Intron_number9/15
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw4340
MethodWGS_Hawaiian_Waterston