WormBase Tree Display for Variation: WBVar00151094
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| WBVar00151094 | Name | Public_name | WBVar00151094 | ||
|---|---|---|---|---|---|
| Other_name (15) | |||||
| HGVSg | CHROMOSOME_I:g.2770982C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y71F9B | |
| Flanking_sequences | ttcgaagagtttcaatgagtttcga | aaatctctaaaatcactgagataca | |||
| Mapping_target | Y71F9B | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01340770 | |||
| WBVar00535253 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004946 | |||
| Transcript | Y71F9B.10g.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y71F9B.10g.1:c.1107G>A | ||||
| HGVSp | CE53858:p.Leu369= | ||||
| cDNA_position | 1129 | ||||
| CDS_position | 1107 | ||||
| Protein_position | 369 | ||||
| Exon_number | 7/17 | ||||
| Codon_change | ttG/ttA | ||||
| Amino_acid_change | L | ||||
| Y71F9B.10d.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y71F9B.10d.1:c.159G>A | ||||
| HGVSp | CE50084:p.Leu53= | ||||
| cDNA_position | 159 | ||||
| CDS_position | 159 | ||||
| Protein_position | 53 | ||||
| Exon_number | 1/9 | ||||
| Codon_change | ttG/ttA | ||||
| Amino_acid_change | L | ||||
| Y71F9B.10c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y71F9B.10c.1:c.1107G>A | ||||
| HGVSp | CE50044:p.Leu369= | ||||
| cDNA_position | 1126 | ||||
| CDS_position | 1107 | ||||
| Protein_position | 369 | ||||
| Exon_number | 7/16 | ||||
| Codon_change | ttG/ttA | ||||
| Amino_acid_change | L | ||||
| Y71F9B.10e.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y71F9B.10e.1:c.159G>A | ||||
| HGVSp | CE50085:p.Leu53= | ||||
| cDNA_position | 159 | ||||
| CDS_position | 159 | ||||
| Protein_position | 53 | ||||
| Exon_number | 1/9 | ||||
| Codon_change | ttG/ttA | ||||
| Amino_acid_change | L | ||||
| Y71F9B.10b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y71F9B.10b.1:c.1107G>A | ||||
| HGVSp | CE53802:p.Leu369= | ||||
| cDNA_position | 1125 | ||||
| CDS_position | 1107 | ||||
| Protein_position | 369 | ||||
| Exon_number | 7/17 | ||||
| Codon_change | ttG/ttA | ||||
| Amino_acid_change | L | ||||
| Y71F9B.10a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y71F9B.10a.1:c.1107G>A | ||||
| HGVSp | CE28808:p.Leu369= | ||||
| cDNA_position | 1122 | ||||
| CDS_position | 1107 | ||||
| Protein_position | 369 | ||||
| Exon_number | 7/16 | ||||
| Codon_change | ttG/ttA | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw4344 | ||||
| Method | WGS_Hawaiian_Waterston |
