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WormBase Tree Display for Variation: WBVar00151366

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Name Class

WBVar00151366NamePublic_nameWBVar00151366
Other_namehaw4616
haw115614
cewivar00163840
CE29136:p.Val534=
Y71F9AL.17.1:c.1602G>A
HGVSgCHROMOSOME_I:g.2898302C>T
Sequence_detailsSMapS_parentSequenceY71F9AL
Flanking_sequencesagtcatcatcccaagctccactcttacacgagtcgactcctgttgggtac
Mapping_targetY71F9AL
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
LaboratoryRW
QX
AX
PersonWBPerson1562
WBPerson4037
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar00535479
WBVar01341206
WBVar01430824
StatusLive
AffectsGeneWBGene00022119
TranscriptY71F9AL.17.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY71F9AL.17.1:c.1602G>A
HGVSpCE29136:p.Val534=
cDNA_position1661
CDS_position1602
Protein_position534
Exon_number4/8
Codon_changegtG/gtA
Amino_acid_changeV
ReferenceWBPaper00038208
WBPaper00040707
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw4616
MethodWGS_Hawaiian_Waterston