WormBase Tree Display for Variation: WBVar00151366
expand all nodes | collapse all nodes | view schema
WBVar00151366 | Name | Public_name | WBVar00151366 | ||
---|---|---|---|---|---|
Other_name | haw4616 | ||||
haw115614 | |||||
cewivar00163840 | |||||
CE29136:p.Val534= | |||||
Y71F9AL.17.1:c.1602G>A | |||||
HGVSg | CHROMOSOME_I:g.2898302C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y71F9AL | |
Flanking_sequences | agtcatcatcccaagctccactctt | acacgagtcgactcctgttgggtac | |||
Mapping_target | Y71F9AL | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
Laboratory | RW | ||||
QX | |||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar00535479 | |||
WBVar01341206 | |||||
WBVar01430824 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022119 | |||
Transcript | Y71F9AL.17.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y71F9AL.17.1:c.1602G>A | ||||
HGVSp | CE29136:p.Val534= | ||||
cDNA_position | 1661 | ||||
CDS_position | 1602 | ||||
Protein_position | 534 | ||||
Exon_number | 4/8 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw4616 | ||||
Method | WGS_Hawaiian_Waterston |