WormBase Tree Display for Variation: WBVar00152020
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WBVar00152020 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00152020 | |||
Other_name | haw5270 | ||||
cewivar00164574 | |||||
W01B11.5b.3:c.1129+64T>C | |||||
W01B11.5b.2:c.1129+64T>C | |||||
W01B11.5c.1:c.676+64T>C | |||||
W01B11.5b.1:c.1129+64T>C | |||||
W01B11.5a.1:c.673+64T>C | |||||
W01B11.5d.1:c.1132+64T>C | |||||
HGVSg | CHROMOSOME_I:g.3272964A>G | ||||
Sequence_details | SMap | S_parent | Sequence | W01B11 | |
Flanking_sequences | agactcagacttagggctaggttca | gcttagacttagacttaggcctaga | |||
Mapping_target | W01B11 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01421693 | |||
WBVar01342200 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004154 | |||
Transcript | W01B11.5d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W01B11.5d.1:c.1132+64T>C | ||||
Intron_number | 8/10 | ||||
W01B11.5c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01B11.5c.1:c.676+64T>C | ||||
Intron_number | 8/10 | ||||
W01B11.5b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01B11.5b.3:c.1129+64T>C | ||||
Intron_number | 8/11 | ||||
W01B11.5b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01B11.5b.2:c.1129+64T>C | ||||
Intron_number | 8/11 | ||||
W01B11.5a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01B11.5a.1:c.673+64T>C | ||||
Intron_number | 7/10 | ||||
W01B11.5b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01B11.5b.1:c.1129+64T>C | ||||
Intron_number | 8/11 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw5270 | ||||
Method | WGS_Hawaiian_Waterston |