WormBase Tree Display for Variation: WBVar00152213
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| WBVar00152213 | Name | Public_name | WBVar00152213 | ||
|---|---|---|---|---|---|
| Other_name | haw5463 | ||||
| W05F2.4k.1:c.3151-1726A>T | |||||
| W05F2.4a.1:c.3262-1726A>T | |||||
| W05F2.4i.1:c.3226-1726A>T | |||||
| W05F2.4e.1:c.3397-1726A>T | |||||
| W05F2.4d.1:c.30+618A>T | |||||
| W05F2.4g.1:c.3187-1726A>T | |||||
| W05F2.4h.1:c.3361-1726A>T | |||||
| W05F2.4f.1:c.3322-1726A>T | |||||
| W05F2.4j.1:c.3286-1726A>T | |||||
| HGVSg | CHROMOSOME_I:g.3385733T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F25F1 | |
| Flanking_sequences | gaacttttaaagtgcactttttttt | aattttgatgactttctaaagtttt | |||
| Mapping_target | F25F1 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00021036 | |||
| Transcript | W05F2.4h.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W05F2.4h.1:c.3361-1726A>T | ||||
| Intron_number | 23/35 | ||||
| W05F2.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W05F2.4a.1:c.3262-1726A>T | ||||
| Intron_number | 24/37 | ||||
| W05F2.4i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W05F2.4i.1:c.3226-1726A>T | ||||
| Intron_number | 23/35 | ||||
| W05F2.4f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W05F2.4f.1:c.3322-1726A>T | ||||
| Intron_number | 22/34 | ||||
| W05F2.4g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W05F2.4g.1:c.3187-1726A>T | ||||
| Intron_number | 22/34 | ||||
| W05F2.4d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W05F2.4d.1:c.30+618A>T | ||||
| Intron_number | 2/15 | ||||
| W05F2.4k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W05F2.4k.1:c.3151-1726A>T | ||||
| Intron_number | 22/34 | ||||
| W05F2.4j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W05F2.4j.1:c.3286-1726A>T | ||||
| Intron_number | 22/34 | ||||
| W05F2.4e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W05F2.4e.1:c.3397-1726A>T | ||||
| Intron_number | 23/35 | ||||
| Remark | [20081124 db] this Variation was previously named hw5463 | ||||
| Method | WGS_Hawaiian_Waterston |
