WormBase Tree Display for Variation: WBVar00152326
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| WBVar00152326 | Name | Public_name | WBVar00152326 | ||
|---|---|---|---|---|---|
| Other_name | haw5576 | ||||
| haw116312 | |||||
| cewivar00072988 | |||||
| Y47G6A.7a.1:c.1146-31A>G | |||||
| Y47G6A.7b.2:c.*15-31A>G | |||||
| Y47G6A.7b.1:c.*15-31A>G | |||||
| Y47G6A.7a.2:c.1146-31A>G | |||||
| HGVSg | CHROMOSOME_I:g.3508191A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y47G6A | |
| Flanking_sequences | gtttacccaacaaaagaaaaaacct | aattttcaatatttttttcaaaaat | |||
| Mapping_target | Y47G6A | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00536177 | |||
| WBVar01342661 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021637 | |||
| Transcript | Y47G6A.7a.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y47G6A.7a.2:c.1146-31A>G | ||||
| Intron_number | 5/6 | ||||
| Y47G6A.7b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y47G6A.7b.1:c.*15-31A>G | ||||
| Intron_number | 8/8 | ||||
| Y47G6A.7a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y47G6A.7a.1:c.1146-31A>G | ||||
| Intron_number | 6/7 | ||||
| Y47G6A.7b.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y47G6A.7b.2:c.*15-31A>G | ||||
| Intron_number | 7/7 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw5576 | ||||
| Method | WGS_Hawaiian_Waterston |
