WormBase Tree Display for Variation: WBVar00152459

WBVar00152459 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00152459
    Other_name: haw5709
      cewivar00164987
      Y47G6A.23c.1:c.3582+485T>C
      Y47G6A.23a.1:c.3582+485T>C
      Y47G6A.23d.1:c.3588+485T>C
      Y47G6A.23b.1:c.3588+485T>C
    HGVSg: CHROMOSOME_I:g.3586234A>G
  Sequence_details: SMap: S_parent: Sequence: Y47G6A
    Flanking_sequences: ttcgtcgattaaaattacatttaaa ccgataggtaaccaatttcgatgatttttggttacctatctgctt
    Mapping_target: Y47G6A
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01342847
    Status: Live
  Affects: Gene: WBGene00003060
    Transcript: Y47G6A.23c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23c.1:c.3582+485T>C
        Intron_number: 15/31
      Y47G6A.23b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23b.1:c.3588+485T>C
        Intron_number: 16/31
      Y47G6A.23a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23a.1:c.3582+485T>C
        Intron_number: 16/32
      Y47G6A.23d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23d.1:c.3588+485T>C
        Intron_number: 16/32
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw5709
  Method: WGS_Hawaiian_Waterston