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WormBase Tree Display for Variation: WBVar00152672

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Name Class

WBVar00152672NamePublic_nameWBVar00152672
Other_namehaw5922
haw116546
cewivar00165131
T21E3.1.1:c.*85G>A
HGVSgCHROMOSOME_I:g.3934800G>A
Sequence_detailsSMapS_parentSequenceT21E3
Flanking_sequencesaatattgcatgatactgtataaaatcattttaactgtcaactaatgttta
Mapping_targetT21E3
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
LaboratoryRW
QX
AX
PersonWBPerson1562
WBPerson4037
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01343153
WBVar00536411
WBVar01431251
StatusLive
AffectsGeneWBGene00020652
TranscriptT21E3.1.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScT21E3.1.1:c.*85G>A
cDNA_position2349
Exon_number7/7
ReferenceWBPaper00038208
WBPaper00040707
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw5922
MethodWGS_Hawaiian_Waterston