WormBase Tree Display for Variation: WBVar00152770
expand all nodes | collapse all nodes | view schema
WBVar00152770 | Name | Public_name | WBVar00152770 | ||
---|---|---|---|---|---|
Other_name | haw6020 | ||||
haw116608 | |||||
cewivar00165165 | |||||
CE08351:p.Cys139= | |||||
C24G7.1.1:c.417C>T | |||||
HGVSg | CHROMOSOME_I:g.4110064C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C24G7 | |
Flanking_sequences | tccaattcccccagattaccatttg | aactttacaccaattcgaaaaactt | |||
Mapping_target | C24G7 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00536473 | |||
WBVar01343288 | |||||
Status | Live | ||||
Affects | Gene | WBGene00016063 | |||
Transcript | C24G7.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C24G7.1.1:c.417C>T | ||||
HGVSp | CE08351:p.Cys139= | ||||
cDNA_position | 417 | ||||
CDS_position | 417 | ||||
Protein_position | 139 | ||||
Exon_number | 5/14 | ||||
Codon_change | tgC/tgT | ||||
Amino_acid_change | C | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw6020 | ||||
Method | WGS_Hawaiian_Waterston |