WormBase Tree Display for Variation: WBVar00153423
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| WBVar00153423 | Name | Public_name | WBVar00153423 | ||
|---|---|---|---|---|---|
| Other_name | haw6673 | ||||
| haw117051 | |||||
| cewivar00165906 | |||||
| F28B3.4g.1:c.1057-348A>T | |||||
| F28B3.4b.1:c.1057-348A>T | |||||
| F28B3.4i.1:c.979-348A>T | |||||
| F28B3.4c.1:c.637-348A>T | |||||
| F28B3.4j.1:c.979-348A>T | |||||
| F28B3.4f.1:c.637-348A>T | |||||
| HGVSg | CHROMOSOME_I:g.4943282A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F28B3 | |
| Flanking_sequences | ctttttgcactcgtattttcattta | ttgttgataagcatactgtgctata | |||
| Mapping_target | F28B3 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01344171 | |||
| WBVar00536916 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00017885 | |||
| Transcript | F28B3.4g.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4g.1:c.1057-348A>T | ||||
| Intron_number | 9/17 | ||||
| F28B3.4b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4b.1:c.1057-348A>T | ||||
| Intron_number | 9/17 | ||||
| F28B3.4j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4j.1:c.979-348A>T | ||||
| Intron_number | 6/13 | ||||
| F28B3.4i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4i.1:c.979-348A>T | ||||
| Intron_number | 6/13 | ||||
| F28B3.4f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4f.1:c.637-348A>T | ||||
| Intron_number | 2/10 | ||||
| F28B3.4c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4c.1:c.637-348A>T | ||||
| Intron_number | 1/8 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw6673 | ||||
| Method | WGS_Hawaiian_Waterston |
