WormBase Tree Display for Variation: WBVar00153444

WBVar00153444 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00153444
    Other_name: haw6694
      cewivar00165932
      F54C1.3a.2:c.1747-7A>G
      F54C1.3b.1:c.1690-7A>G
      F54C1.3a.1:c.1747-7A>G
    HGVSg: CHROMOSOME_I:g.5001548A>G
  Sequence_details: SMap: S_parent: Sequence: F54C1
    Flanking_sequences: aaaaaaaattaaagcaaaattacaa tttcagttgaatcttccgaagaatg
    Mapping_target: F54C1
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01344198
    Status: Live
  Affects: Gene: WBGene00003221
    Transcript: F54C1.3a.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: F54C1.3a.1:c.1747-7A>G
        Intron_number: 13/16
      F54C1.3b.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: F54C1.3b.1:c.1690-7A>G
        Intron_number: 12/15
      F54C1.3a.2 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: F54C1.3a.2:c.1747-7A>G
        Intron_number: 13/17
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw6694
  Method: WGS_Hawaiian_Waterston