WormBase Tree Display for Variation: WBVar00153462

WBVar00153462 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00153462
    Other_name: haw6712
      cewivar00165953
      C46H11.4f.1:c.312+461T>C
      C46H11.4f.2:c.312+461T>C
      C46H11.4e.1:c.459+461T>C
      C46H11.4c.1:c.420+461T>C
      C46H11.4b.1:c.219+461T>C
      C46H11.4a.1:c.-77T>C
    HGVSg: CHROMOSOME_I:g.5037314T>C
  Sequence_details: SMap: S_parent: Sequence: C46H11
    Flanking_sequences: tttcgaaacgagtcaacgcactcca catttaaaaaaattacttatttcga
    Mapping_target: C46H11
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006629 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01344222
        WBVar01282660
    Status: Live
  Affects: Gene: WBGene00002979
    Transcript: C46H11.4f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.4f.1:c.312+461T>C
        Intron_number: 5/10
      C46H11.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.4c.1:c.420+461T>C
        Intron_number: 6/11
      C46H11.4a.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.4a.1:c.-77T>C
        cDNA_position: 161
        Exon_number: 1/8
      C46H11.4f.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.4f.2:c.312+461T>C
        Intron_number: 4/9
      C46H11.4e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.4e.1:c.459+461T>C
        Intron_number: 5/9
      C46H11.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C46H11.4b.1:c.219+461T>C
        Intron_number: 3/8
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw6712
  Method: WGS_Hawaiian_Waterston