WormBase Tree Display for Variation: WBVar00153612
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WBVar00153612 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00153612 | |||
Other_name | haw6862 | ||||
cewivar00166122 | |||||
CE33116:p.Pro45= | |||||
F59A3.2.1:c.135C>T | |||||
HGVSg | CHROMOSOME_I:g.5512288C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F59A3 | |
Flanking_sequences | gatgcttcaatcaaaatcgaactcc | gatcaaaaaactcgagattctgcag | |||
Mapping_target | F59A3 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01344414 | |||
Status | Live | ||||
Affects | Gene | WBGene00019075 | |||
Transcript | F59A3.2.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F59A3.2.1:c.135C>T | ||||
HGVSp | CE33116:p.Pro45= | ||||
cDNA_position | 150 | ||||
CDS_position | 135 | ||||
Protein_position | 45 | ||||
Exon_number | 3/9 | ||||
Codon_change | ccC/ccT | ||||
Amino_acid_change | P | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw6862 | ||||
Method | WGS_Hawaiian_Waterston |