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WormBase Tree Display for Variation: WBVar00154003

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Name Class

WBVar00154003NamePublic_nameWBVar00154003
Other_namehaw7253
haw117414
cewivar00166569
C10G11.5c.1:c.33-73G>A
C10G11.5a.1:c.171-73G>A
C10G11.5c.2:c.33-73G>A
C10G11.5b.1:c.171-73G>A
HGVSgCHROMOSOME_I:g.6295834G>A
Sequence_detailsSMapS_parentSequenceC10G11
Flanking_sequencesgaaagttgaaaagttttttactgtcaactcggtctcatcatgacttaaaa
Mapping_targetC10G11
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00537279
WBVar01344899
StatusLive
AffectsGeneWBGene00004068
TranscriptC10G11.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC10G11.5a.1:c.171-73G>A
Intron_number3/10
C10G11.5c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC10G11.5c.2:c.33-73G>A
Intron_number3/10
C10G11.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC10G11.5b.1:c.171-73G>A
Intron_number2/9
C10G11.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC10G11.5c.1:c.33-73G>A
Intron_number2/9
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw7253
MethodWGS_Hawaiian_Waterston