WormBase Tree Display for Variation: WBVar00154281
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WBVar00154281 | Name | Public_name | WBVar00154281 | ||
---|---|---|---|---|---|
Other_name | haw7531 | ||||
haw117592 | |||||
cewivar00166873 | |||||
ZK524.2k.1:c.59-739A>G | |||||
ZK524.2i.1:c.104-739A>G | |||||
ZK524.2f.1:c.104-739A>G | |||||
ZK524.2j.1:c.59-739A>G | |||||
ZK524.2e.1:c.104-739A>G | |||||
ZK524.2d.1:c.104-739A>G | |||||
ZK524.2a.1:c.104-739A>G | |||||
HGVSg | CHROMOSOME_I:g.7424195A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C44E1 | |
Flanking_sequences | tatagttcgaaaaaccccacattct | aacgtaagttgacaaaatcccgcta | |||
Mapping_target | C44E1 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00537457 | |||
WBVar01345237 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006752 | |||
Transcript | ZK524.2f.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2f.1:c.104-739A>G | ||||
Intron_number | 2/29 | ||||
ZK524.2j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2j.1:c.59-739A>G | ||||
Intron_number | 2/28 | ||||
ZK524.2k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2k.1:c.59-739A>G | ||||
Intron_number | 2/28 | ||||
ZK524.2i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2i.1:c.104-739A>G | ||||
Intron_number | 2/28 | ||||
ZK524.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2a.1:c.104-739A>G | ||||
Intron_number | 2/29 | ||||
ZK524.2e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2e.1:c.104-739A>G | ||||
Intron_number | 2/29 | ||||
ZK524.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK524.2d.1:c.104-739A>G | ||||
Intron_number | 2/30 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw7531 | ||||
Method | WGS_Hawaiian_Waterston |