WormBase Tree Display for Variation: WBVar00154457
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WBVar00154457 | Name | Public_name | WBVar00154457 | ||
---|---|---|---|---|---|
Other_name | haw7707 | ||||
haw117700 | |||||
cewivar00167058 | |||||
CE27141:p.Phe397= | |||||
F26A3.8a.1:c.1191C>T | |||||
CE46152:p.Phe316= | |||||
F26A3.8b.1:c.948C>T | |||||
HGVSg | CHROMOSOME_I:g.7648171G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F26A3 | |
Flanking_sequences | tgtagtaccaaatgataatttccag | aaatttttccaatgttgctcattca | |||
Mapping_target | F26A3 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01345439 | |||
WBVar00537565 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004508 | |||
Transcript | F26A3.8a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F26A3.8a.1:c.1191C>T | ||||
HGVSp | CE27141:p.Phe397= | ||||
cDNA_position | 1201 | ||||
CDS_position | 1191 | ||||
Protein_position | 397 | ||||
Exon_number | 8/22 | ||||
Codon_change | ttC/ttT | ||||
Amino_acid_change | F | ||||
F26A3.8b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F26A3.8b.1:c.948C>T | ||||
HGVSp | CE46152:p.Phe316= | ||||
cDNA_position | 948 | ||||
CDS_position | 948 | ||||
Protein_position | 316 | ||||
Exon_number | 6/19 | ||||
Codon_change | ttC/ttT | ||||
Amino_acid_change | F | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw7707 | ||||
Method | WGS_Hawaiian_Waterston |