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WormBase Tree Display for Variation: WBVar00154520

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Name Class

WBVar00154520EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00154520
Other_namehaw7770
cewivar00167130
F27D4.2b.1:c.-231+4894C>T
F27D4.2a.3:c.-231+4894C>T
F27D4.2a.2:c.-228+4894C>T
F27D4.2b.2:c.-228+4894C>T
HGVSgCHROMOSOME_I:g.7713548G>A
Sequence_detailsSMapS_parentSequenceF27D4
Flanking_sequencesttgagaacaatgagtgacttattggcctcataaaatgagctaaccgttgt
Mapping_targetF27D4
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01345516
StatusLive
AffectsGeneWBGene00009188
TranscriptF27D4.2a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF27D4.2a.3:c.-231+4894C>T
Intron_number1/5
F27D4.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF27D4.2a.2:c.-228+4894C>T
Intron_number1/5
F27D4.2b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF27D4.2b.2:c.-228+4894C>T
Intron_number1/5
F27D4.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF27D4.2b.1:c.-231+4894C>T
Intron_number1/5
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw7770
MethodWGS_Hawaiian_Waterston