WormBase Tree Display for Variation: WBVar00154766
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WBVar00154766 | Name | Public_name | WBVar00154766 | ||
---|---|---|---|---|---|
Other_name | haw8016 | ||||
haw117914 | |||||
cewivar00167422 | |||||
T22C1.10b.1:c.459T>C | |||||
CE36203:p.Gly153= | |||||
T22C1.10a.1:c.507T>C | |||||
CE06498:p.Gly169= | |||||
HGVSg | CHROMOSOME_I:g.7962669T>C | ||||
Sequence_details | SMap | S_parent | Sequence | T22C1 | |
Flanking_sequences | ttattgctctggggactcttgacgg | catgtttatttctttaccgaacaag | |||
Mapping_target | T22C1 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01345828 | |||
WBVar00537779 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004318 | |||
Transcript | T22C1.10a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T22C1.10a.1:c.507T>C | ||||
HGVSp | CE06498:p.Gly169= | ||||
cDNA_position | 520 | ||||
CDS_position | 507 | ||||
Protein_position | 169 | ||||
Exon_number | 4/14 | ||||
Codon_change | ggT/ggC | ||||
Amino_acid_change | G | ||||
T22C1.10b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T22C1.10b.1:c.459T>C | ||||
HGVSp | CE36203:p.Gly153= | ||||
cDNA_position | 459 | ||||
CDS_position | 459 | ||||
Protein_position | 153 | ||||
Exon_number | 3/12 | ||||
Codon_change | ggT/ggC | ||||
Amino_acid_change | G | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw8016 | ||||
Method | WGS_Hawaiian_Waterston |