Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00155019

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00155019EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00155019
Other_namehaw8269
cewivar00167701
F52B5.5a.1:c.1611G>A
F52B5.5b.3:c.270G>A
CE38369:p.Leu90=
F52B5.5b.1:c.270G>A
CE29805:p.Leu537=
F52B5.5b.4:c.270G>A
F52B5.5b.2:c.270G>A
HGVSgCHROMOSOME_I:g.8328335G>A
Sequence_detailsSMapS_parentSequenceF52B5
Flanking_sequencesttttgattcacaataaatttcagcttcgactgctgagtatacaaaagtcg
Mapping_targetF52B5
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01422031
WBVar01346131
StatusLive
AffectsGeneWBGene00000467
TranscriptF52B5.5b.1VEP_consequencesplice_region_variant,synonymous_variant
VEP_impactLOW
HGVScF52B5.5b.1:c.270G>A
HGVSpCE38369:p.Leu90=
cDNA_position454
CDS_position270
Protein_position90
Exon_number4/6
Codon_changectG/ctA
Amino_acid_changeL
F52B5.5b.4VEP_consequencesplice_region_variant,synonymous_variant
VEP_impactLOW
HGVScF52B5.5b.4:c.270G>A
HGVSpCE38369:p.Leu90=
cDNA_position2350
CDS_position270
Protein_position90
Exon_number11/13
Codon_changectG/ctA
Amino_acid_changeL
F52B5.5b.2VEP_consequencesplice_region_variant,synonymous_variant
VEP_impactLOW
HGVScF52B5.5b.2:c.270G>A
HGVSpCE38369:p.Leu90=
cDNA_position1632
CDS_position270
Protein_position90
Exon_number13/15
Codon_changectG/ctA
Amino_acid_changeL
F52B5.5a.1VEP_consequencesplice_region_variant,synonymous_variant
VEP_impactLOW
HGVScF52B5.5a.1:c.1611G>A
HGVSpCE29805:p.Leu537=
cDNA_position1617
CDS_position1611
Protein_position537
Exon_number13/15
Codon_changectG/ctA
Amino_acid_changeL
F52B5.5b.3VEP_consequencesplice_region_variant,synonymous_variant
VEP_impactLOW
HGVScF52B5.5b.3:c.270G>A
HGVSpCE38369:p.Leu90=
cDNA_position2068
CDS_position270
Protein_position90
Exon_number12/14
Codon_changectG/ctA
Amino_acid_changeL
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw8269
MethodWGS_Hawaiian_Waterston