WormBase Tree Display for Variation: WBVar00155166
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WBVar00155166 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00155166 | |||
Other_name | haw8416 | ||||
cewivar00167863 | |||||
T01H8.1e.1:c.217-94A>G | |||||
T01H8.1c.1:c.118-94A>G | |||||
T01H8.1b.1:c.64-94A>G | |||||
T01H8.1d.1:c.178-94A>G | |||||
T01H8.1a.1:c.235-94A>G | |||||
HGVSg | CHROMOSOME_I:g.8577268T>C | ||||
Sequence_details | SMap | S_parent | Sequence | T01H8 | |
Flanking_sequences | tgaagtatgttcgtcattgaaaatt | cattttacaagtcattaatttgatg | |||
Mapping_target | T01H8 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01346304 | |||
WBVar01422192 | |||||
Status | Live | ||||
Affects | Gene | WBGene00011352 | |||
Transcript | T01H8.1e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.1e.1:c.217-94A>G | ||||
Intron_number | 3/14 | ||||
T01H8.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.1a.1:c.235-94A>G | ||||
Intron_number | 3/14 | ||||
T01H8.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.1d.1:c.178-94A>G | ||||
Intron_number | 3/13 | ||||
T01H8.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.1c.1:c.118-94A>G | ||||
Intron_number | 2/13 | ||||
T01H8.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T01H8.1b.1:c.64-94A>G | ||||
Intron_number | 2/13 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw8416 | ||||
Method | WGS_Hawaiian_Waterston |