WormBase Tree Display for Variation: WBVar00155220
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WBVar00155220 | Name | Public_name | WBVar00155220 | ||
---|---|---|---|---|---|
Other_name | haw8470 | ||||
haw118198 | |||||
cewivar00167920 | |||||
F43G9.6a.1:c.1311+116A>G | |||||
F43G9.6b.1:c.930+116A>G | |||||
HGVSg | CHROMOSOME_I:g.8628974T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F43G9 | |
Flanking_sequences | ttgaacacaaaatgcaatttcaaaa | acagtaagtctatatcctacagtaa | |||
Mapping_target | F43G9 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01422253 | |||
WBVar00538063 | |||||
WBVar01346368 | |||||
Status | Live | ||||
Affects | Gene | WBGene00001414 | |||
Transcript | F43G9.6a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F43G9.6a.1:c.1311+116A>G | ||||
Intron_number | 8/22 | ||||
F43G9.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F43G9.6b.1:c.930+116A>G | ||||
Intron_number | 5/18 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw8470 | ||||
Method | WGS_Hawaiian_Waterston |