WormBase Tree Display for Variation: WBVar00155549
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| WBVar00155549 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00155549 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_I:g.9106458C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | W10D5 | |
| Flanking_sequences | ccagtttctcacgagcgacatcgtg | caattcgcttccatatcgatttttc | |||
| Mapping_target | W10D5 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01346808 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00001574 | |||
| Transcript | W10D5.3g.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W10D5.3g.1:c.252+544G>A | ||||
| Intron_number | 5/13 | ||||
| W10D5.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W10D5.3c.1:c.253-398G>A | ||||
| Intron_number | 5/15 | ||||
| W10D5.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W10D5.3d.1:c.253-404G>A | ||||
| Intron_number | 5/13 | ||||
| W10D5.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W10D5.3f.1:c.253-398G>A | ||||
| Intron_number | 5/15 | ||||
| W10D5.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W10D5.3a.1:c.253-398G>A | ||||
| Intron_number | 5/14 | ||||
| W10D5.3c.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W10D5.3c.2:c.253-398G>A | ||||
| Intron_number | 5/15 | ||||
| W10D5.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W10D5.3e.1:c.253-398G>A | ||||
| Intron_number | 5/14 | ||||
| W10D5.3c.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W10D5.3c.3:c.253-398G>A | ||||
| Intron_number | 5/15 | ||||
| W10D5.3a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W10D5.3a.2:c.253-398G>A | ||||
| Intron_number | 5/14 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw8799 | ||||
| Method | WGS_Hawaiian_Waterston |
