WormBase Tree Display for Variation: WBVar00155614
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| WBVar00155614 | Name | Public_name | WBVar00155614 | ||
|---|---|---|---|---|---|
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_I:g.9182952A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F25H5 | |
| Flanking_sequences | cattgtgaataatatgtttaaaaaa | ttccatccagtcaaagcgtcacgga | |||
| Mapping_target | F25H5 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
| WGS_De_Bono | |||||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar00244396 | |||
| WBVar01346886 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006407 | |||
| Transcript | F25H5.1b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F25H5.1b.1:c.1691-106T>G | ||||
| Intron_number | 11/13 | ||||
| F25H5.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F25H5.1e.1:c.1292-106T>G | ||||
| Intron_number | 9/11 | ||||
| F25H5.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F25H5.1g.1:c.356-106T>G | ||||
| Intron_number | 1/3 | ||||
| F25H5.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F25H5.1h.1:c.2123-106T>G | ||||
| Intron_number | 15/17 | ||||
| F25H5.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F25H5.1f.1:c.1802-106T>G | ||||
| Intron_number | 13/15 | ||||
| F25H5.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F25H5.1c.1:c.1526-106T>G | ||||
| Intron_number | 10/12 | ||||
| F25H5.1i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F25H5.1i.1:c.2213-106T>G | ||||
| Intron_number | 16/18 | ||||
| F25H5.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F25H5.1d.1:c.704-106T>G | ||||
| Intron_number | 4/5 | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw8864 | ||||
| Method | WGS_Hawaiian_Waterston |
