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WormBase Tree Display for Variation: WBVar00155620

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Name Class

WBVar00155620NamePublic_nameWBVar00155620
Other_namesnp_F25H5[5]
haw8870
cewivar00168411
F25H5.1h.1:c.1389+1463T>G
F25H5.1c.1:c.792+1463T>G
F25H5.1f.1:c.1068+1463T>G
F25H5.1b.1:c.957+1463T>G
F25H5.1i.1:c.1479+1463T>G
F25H5.1e.1:c.558+1463T>G
HGVSgCHROMOSOME_I:g.9190094A>C
Sequence_detailsSMapS_parentSequenceF25H5
Flanking_sequencestcaacagaagcttatcgaaaaaaaaacacaaaaatcaaataaagtcatca
Mapping_targetF25H5
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00244397
WBVar01346893
StatusLive
AffectsGeneWBGene00006407
TranscriptF25H5.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF25H5.1c.1:c.792+1463T>G
Intron_number6/12
F25H5.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF25H5.1b.1:c.957+1463T>G
Intron_number7/13
F25H5.1i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF25H5.1i.1:c.1479+1463T>G
Intron_number12/18
F25H5.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF25H5.1e.1:c.558+1463T>G
Intron_number5/11
F25H5.1h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF25H5.1h.1:c.1389+1463T>G
Intron_number11/17
F25H5.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF25H5.1f.1:c.1068+1463T>G
Intron_number9/15
ReferenceWBPaper00004703
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw8870
MethodWGS_Hawaiian_Waterston