WormBase Tree Display for Variation: WBVar00155631
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WBVar00155631 | Name | Public_name | WBVar00155631 | ||
---|---|---|---|---|---|
Other_name | haw8881 | ||||
F25H5.1i.1:c.834-2730T>A | |||||
F25H5.1h.1:c.744-2730T>A | |||||
F25H5.1f.1:c.423-2730T>A | |||||
F25H5.1b.1:c.311+955T>A | |||||
F25H5.1c.1:c.147-2730T>A | |||||
HGVSg | CHROMOSOME_I:g.9197854A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C45G3 | |
Flanking_sequences | cgagtataagtactattattttttt | tatgcactagagtttatgtgatgtg | |||
Mapping_target | C45G3 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00006407 | |||
Transcript | F25H5.1c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F25H5.1c.1:c.147-2730T>A | ||||
Intron_number | 1/12 | ||||
F25H5.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25H5.1b.1:c.311+955T>A | ||||
Intron_number | 2/13 | ||||
F25H5.1i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25H5.1i.1:c.834-2730T>A | ||||
Intron_number | 7/18 | ||||
F25H5.1h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25H5.1h.1:c.744-2730T>A | ||||
Intron_number | 6/17 | ||||
F25H5.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25H5.1f.1:c.423-2730T>A | ||||
Intron_number | 4/15 | ||||
Remark | [20081124 db] this Variation was previously named hw8881 | ||||
Method | WGS_Hawaiian_Waterston |