WormBase Tree Display for Variation: WBVar00155871

WBVar00155871 Name: Public_name: WBVar00155871
    Other_name: haw9121
      haw118618
      cewivar00073851
      C36F7.4c.1:c.727+1247T>A
      C36F7.4b.1:c.566-1547T>A
      C36F7.4g.1:c.727+1247T>A
      C36F7.4f.1:c.574+1247T>A
      C36F7.4e.1:c.727+1247T>A
      C36F7.4a.2:c.296-1547T>A
      C36F7.4a.1:c.296-1547T>A
    HGVSg: CHROMOSOME_I:g.9569777A>T
  Sequence_details: SMap: S_parent: Sequence: C36F7
    Flanking_sequences: aggatcctcgaggacaatcttattt ttttttttttccaaaaaatgtgttt
    Mapping_target: C36F7
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01347197
        WBVar00538483
    Status: Live
  Affects: Gene: WBGene00004372
    Transcript: C36F7.4a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C36F7.4a.2:c.296-1547T>A
        Intron_number: 6/11
      C36F7.4g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C36F7.4g.1:c.727+1247T>A
        Intron_number: 5/10
      C36F7.4e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C36F7.4e.1:c.727+1247T>A
        Intron_number: 5/11
      C36F7.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C36F7.4c.1:c.727+1247T>A
        Intron_number: 5/10
      C36F7.4f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C36F7.4f.1:c.574+1247T>A
        Intron_number: 5/12
      C36F7.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C36F7.4a.1:c.296-1547T>A
        Intron_number: 5/10
      C36F7.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C36F7.4b.1:c.566-1547T>A
        Intron_number: 4/10
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw9121
  Method: WGS_Hawaiian_Waterston