WormBase Tree Display for Variation: WBVar00155920
expand all nodes | collapse all nodes | view schema
WBVar00155920 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00155920 | |||
Other_name | haw9170 | ||||
cewivar00168750 | |||||
K07A1.9b.1:c.170+28T>C | |||||
K07A1.9e.1:c.30-100T>C | |||||
K07A1.9d.1:c.252-100T>C | |||||
K07A1.9a.1:c.254+28T>C | |||||
K07A1.9f.1:c.47+28T>C | |||||
K07A1.9c.1:c.318+28T>C | |||||
HGVSg | CHROMOSOME_I:g.9614115A>G | ||||
Sequence_details | SMap | S_parent | Sequence | K07A1 | |
Flanking_sequences | aaatttgaacatttctaaaaatcga | caaaattcttaaacctactaatccc | |||
Mapping_target | K07A1 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01347264 | |||
Status | Live | ||||
Affects | Gene | WBGene00010615 | |||
Transcript | K07A1.9c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K07A1.9c.1:c.318+28T>C | ||||
Intron_number | 5/10 | ||||
K07A1.9f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K07A1.9f.1:c.47+28T>C | ||||
Intron_number | 1/5 | ||||
K07A1.9d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K07A1.9d.1:c.252-100T>C | ||||
Intron_number | 4/9 | ||||
K07A1.9e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K07A1.9e.1:c.30-100T>C | ||||
Intron_number | 1/5 | ||||
K07A1.9b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K07A1.9b.1:c.170+28T>C | ||||
Intron_number | 3/8 | ||||
K07A1.9a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K07A1.9a.1:c.254+28T>C | ||||
Intron_number | 4/9 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw9170 | ||||
Method | WGS_Hawaiian_Waterston |