WormBase Tree Display for Variation: WBVar00156103
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WBVar00156103 | Name | Public_name | WBVar00156103 | ||
---|---|---|---|---|---|
Other_name | haw9353 | ||||
haw118785 | |||||
cewivar00168984 | |||||
F26E4.4.1:c.81T>A | |||||
CE09688:p.Gly27= | |||||
HGVSg | CHROMOSOME_I:g.9772480A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F26E4 | |
Flanking_sequences | tcccagctcctcttgtcgatgtaga | cctccacgattatttttctgttgag | |||
Mapping_target | F26E4 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01347502 | |||
WBVar00538650 | |||||
Status | Live | ||||
Affects | Gene | WBGene00009159 | |||
Transcript | F26E4.4.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F26E4.4.1:c.81T>A | ||||
HGVSp | CE09688:p.Gly27= | ||||
cDNA_position | 86 | ||||
CDS_position | 81 | ||||
Protein_position | 27 | ||||
Exon_number | 2/6 | ||||
Codon_change | ggT/ggA | ||||
Amino_acid_change | G | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw9353 | ||||
Method | WGS_Hawaiian_Waterston |