WormBase Tree Display for Variation: WBVar00157311
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WBVar00157311 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00157311 | |||
Other_name | haw10561 | ||||
cewivar00170092 | |||||
F15D3.1d.1:c.6681+253G>A | |||||
F15D3.1c.1:c.9480+253G>A | |||||
F15D3.1i.1:c.9447+253G>A | |||||
F15D3.1e.1:c.3867+253G>A | |||||
F15D3.1a.1:c.10158+253G>A | |||||
F15D3.1j.1:c.6648+253G>A | |||||
F15D3.1h.1:c.10125+253G>A | |||||
HGVSg | CHROMOSOME_I:g.11530731C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F32B4 | |
Flanking_sequences | ataaaaaagttgtcaactaacagaa | gtgcaaaaatattttttaatcattt | |||
Mapping_target | F32B4 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (23) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01349281 | |||
WBVar01285008 | |||||
WBVar01423948 | |||||
Status | Live | ||||
Affects | Gene | WBGene00001131 | |||
Transcript | F15D3.1j.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F15D3.1j.1:c.6648+253G>A | ||||
Intron_number | 35/39 | ||||
F15D3.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F15D3.1a.1:c.10158+253G>A | ||||
Intron_number | 43/48 | ||||
F15D3.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F15D3.1d.1:c.6681+253G>A | ||||
Intron_number | 27/31 | ||||
F15D3.1i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F15D3.1i.1:c.9447+253G>A | ||||
Intron_number | 37/41 | ||||
F15D3.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F15D3.1c.1:c.9480+253G>A | ||||
Intron_number | 38/42 | ||||
F15D3.1h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F15D3.1h.1:c.10125+253G>A | ||||
Intron_number | 41/46 | ||||
F15D3.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F15D3.1e.1:c.3867+253G>A | ||||
Intron_number | 15/19 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw10561 | ||||
Method | WGS_Hawaiian_Waterston |