WormBase Tree Display for Variation: WBVar00157476
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WBVar00157476 | Name | Public_name | WBVar00157476 | ||
---|---|---|---|---|---|
Other_name | haw10726 | ||||
haw119769 | |||||
cewivar00170314 | |||||
W04G5.5.1:c.44T>G | |||||
CE47779:p.Leu15Ter | |||||
HGVSg | CHROMOSOME_I:g.11634656T>G | ||||
Sequence_details | SMap | S_parent | Sequence | W04G5 | |
Flanking_sequences | cgaaactcgcaaattgaatcactgt | aagttcaaatcggtaagattttttc | |||
Mapping_target | W04G5 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01349544 | |||
WBVar00539634 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004275 | |||
WBGene00012266 | |||||
Transcript | W04G5.5.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | W04G5.5.1:c.44T>G | ||||
HGVSp | CE47779:p.Leu15Ter | ||||
cDNA_position | 44 | ||||
CDS_position | 44 | ||||
Protein_position | 15 | ||||
Exon_number | 1/11 | ||||
Codon_change | tTa/tGa | ||||
Amino_acid_change | L/* | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw10726 | ||||
Method | WGS_Hawaiian_Waterston |