WormBase Tree Display for Variation: WBVar00157788
expand all nodes | collapse all nodes | view schema
WBVar00157788 | Name | Public_name | WBVar00157788 | ||
---|---|---|---|---|---|
Other_name | haw11038 | ||||
haw120009 | |||||
cewivar00170772 | |||||
CE28072:p.Leu142= | |||||
T02G6.3.1:c.426G>A | |||||
HGVSg | CHROMOSOME_I:g.11814297G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T02G6 | |
Flanking_sequences | tgacggatgattggatgaaggattt | gacgagaataggaagagcaagaaga | |||
Mapping_target | T02G6 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00539874 | |||
WBVar01350037 | |||||
Status | Live | ||||
Affects | Gene | WBGene00011386 | |||
Transcript | T02G6.3.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T02G6.3.1:c.426G>A | ||||
HGVSp | CE28072:p.Leu142= | ||||
cDNA_position | 426 | ||||
CDS_position | 426 | ||||
Protein_position | 142 | ||||
Exon_number | 3/4 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw11038 | ||||
Method | WGS_Hawaiian_Waterston |