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WormBase Tree Display for Variation: WBVar00157887

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Name Class

WBVar00157887EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00157887
Other_namehaw11137
cewivar00170894
Y47H9C.4b.1:c.3124+406T>A
Y47H9C.4d.1:c.-819T>A
Y47H9C.4c.1:c.3049+1615T>A
Y47H9C.4a.1:c.3247+283T>A
HGVSgCHROMOSOME_I:g.11853996A>T
Sequence_detailsSMapS_parentSequenceY47H9C
Flanking_sequencesaaacttttacatttaaaaaaaccctcagtttttcaggctttttctcgtaa
Mapping_targetY47H9C
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01350168
StatusLive
AffectsGeneWBGene00000415
TranscriptY47H9C.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY47H9C.4a.1:c.3247+283T>A
Intron_number11/12
Y47H9C.4d.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY47H9C.4d.1:c.-819T>A
cDNA_position467
Exon_number1/4
Y47H9C.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY47H9C.4c.1:c.3049+1615T>A
Intron_number10/11
Y47H9C.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY47H9C.4b.1:c.3124+406T>A
Intron_number11/12
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw11137
MethodWGS_Hawaiian_Waterston