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WormBase Tree Display for Variation: WBVar00157939

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Name Class

WBVar00157939EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00157939
Other_namehaw11189
cewivar00075143
Y47H9C.4c.1:c.149+197T>A
Y47H9C.4b.1:c.149+197T>A
Y47H9C.4a.1:c.149+197T>A
HGVSgCHROMOSOME_I:g.11867754A>T
Sequence_detailsSMapS_parentSequenceY47H9C
Flanking_sequencesatgaaaaaatataattttgtaatttatgcttttttccaggtttttgtaaa
Mapping_targetY47H9C
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (24)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01424673
WBVar01285749
WBVar01350218
StatusLive
AffectsGeneWBGene00000415
TranscriptY47H9C.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY47H9C.4a.1:c.149+197T>A
Intron_number2/12
Y47H9C.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY47H9C.4c.1:c.149+197T>A
Intron_number2/11
Y47H9C.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY47H9C.4b.1:c.149+197T>A
Intron_number2/12
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw11189
MethodWGS_Hawaiian_Waterston