WormBase Tree Display for Variation: WBVar00158284
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WBVar00158284 | Name | Public_name | WBVar00158284 | ||
---|---|---|---|---|---|
Other_name | haw11534 | ||||
haw120356 | |||||
cewivar00171280 | |||||
F58D5.4b.1:c.87-1714A>T | |||||
F58D5.4a.1:c.99-1714A>T | |||||
HGVSg | CHROMOSOME_I:g.12056757T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F58D5 | |
Flanking_sequences | cgaggaattgagctcaagtggacaa | ttgccgaaattaggcaaatcggcaa | |||
Mapping_target | F58D5 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00540221 | |||
WBVar01350717 | |||||
Status | Live | ||||
Affects | Gene | WBGene00002240 | |||
Transcript | F58D5.4b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F58D5.4b.1:c.87-1714A>T | ||||
Intron_number | 3/8 | ||||
F58D5.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F58D5.4a.1:c.99-1714A>T | ||||
Intron_number | 3/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw11534 | ||||
Method | WGS_Hawaiian_Waterston |