WormBase Tree Display for Variation: WBVar00158324
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WBVar00158324 | Name | Public_name | WBVar00158324 | ||
---|---|---|---|---|---|
Other_name | haw11574 | ||||
F58D5.2b.2:c.-54-49T>C | |||||
F58D5.2b.1:c.-54-49T>C | |||||
F58D5.2a.1:c.325-49T>C | |||||
F58D5.2b.3:c.-55+12T>C | |||||
HGVSg | CHROMOSOME_I:g.12066379A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F58D5 | |
Flanking_sequences | ttttatttgcatttagaatagggaa | tcgaattttaccttaaaaaattaaa | |||
Mapping_target | F58D5 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00010242 | |||
Transcript | F58D5.2b.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F58D5.2b.2:c.-54-49T>C | ||||
Intron_number | 1/4 | ||||
F58D5.2b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F58D5.2b.3:c.-55+12T>C | ||||
Intron_number | 1/4 | ||||
F58D5.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F58D5.2b.1:c.-54-49T>C | ||||
Intron_number | 1/4 | ||||
F58D5.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F58D5.2a.1:c.325-49T>C | ||||
Intron_number | 3/5 | ||||
Remark | [20081124 db] this Variation was previously named hw11574 | ||||
Method | WGS_Hawaiian_Waterston |